CS 4973 – Projects in HPC

Course Materials:

Important Files

• SSH Secure Shell 3.2.9

 
Links

• Creating Shared Directories

 
Genome Links

• Harvard Personal Genome Project
• SNPedia

 
Genome Documents

• To Do List for Genome Group

 
Genome Programs

• Full Genome Data Parser
• SNP Hunter (beta)

 
Programs

• List Generator/Reader Programs
• Shell Sort Zip file
• Hello World Cyclic with Makefile (Zip File)
• Hello Worlds (Zip File)
• Matrix Head Node Double Distribute (Zip File)
• Matrix Multiplication Module (Zip File)

 
Instructional Documents

• Compiling and running programs on fully liberated BCCD cluster: view *here*
• Logging on to Kraken: view *here*
• Compiling C, C++ and Fortran programs: view *here*
• Compiling MPI programs: view *here*
• Running long programs using ‘screen’: view *here*